Compare Cheap Hotels in San Juan Island

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Cheap San Juan Island Hotels

Inn to the Woods B&B

46 Elena Drive Friday Harbor WA

1.46 mi from city center

Located in Friday Harbor, Inn to the Woods B&B is in a national park, within a 10-minute drive of Whale Museum and Wescott Bay.

Breakfast included

Pet friendly

Friday Harbor House

130 West Street Friday Harbor WA

$181 nightly

$201 total

Dec 9 - Dec 10

Total with taxes and fees

3.01 mi from city center

When you stay at Friday Harbor House in Friday Harbor, you'll be near the airport, just steps from Whale Museum and 7 minutes by foot from San Juan Islands Museum of Art.

Parking included

Free WiFi

Snug Harbor Resort

1997 Mitchell Bay Rd Friday Harbor WA

$206 nightly

$227 total

Dec 6 - Dec 7

Total with taxes and fees

4.35 mi from city center

Located in Friday Harbor, Snug Harbor Resort is within a 10-minute drive of San Juan County Park and English Camp.

Parking included

Free WiFi

Friday Harbor Suites

680 Spring Street Friday Harbor WA

$195 nightly

$216 total

Dec 6 - Dec 7

Total with taxes and fees

Free Cancellation

Reserve now, pay when you stay

2.82 mi from city center

When you a stay at Friday Harbor Suites in Friday Harbor, you'll be near the airport, within a 5-minute walk of San Juan Historical Society and Museum and San Juan Islands Museum of Art.

Hot Tub

Parking included

Earthbox Inn & Spa

410 Spring Street Friday Harbor WA

$205 nightly

$227 total

Dec 31 - Jan 1, 2026

Total with taxes and fees

2.98 mi from city center

A stay at Earthbox Inn & Spa places you in the heart of Friday Harbor, a 1-minute drive from Whale Museum and 6 minutes from San Juan Golf & Tennis Club.

Pool

Hot Tub

Roche Harbor Resort

248 Reuben Memorial Dr Friday Harbor WA

$278 nightly

$307 total

Dec 7 - Dec 8

Total with taxes and fees

5.18 mi from city center

Located in Friday Harbor, Roche Harbor Resort is on the beach, within a 5-minute walk of Roche Harbor Marina and San Juan Islands Sculpture Park.

Pool

Spa

Tucker House Inn

275 C Street Friday Harbor WA

$177 nightly

$196 total

Dec 7 - Dec 8

Total with taxes and fees

3.19 mi from city center

With a stay at Tucker House Inn in Friday Harbor, you'll be near the airport, just a 5-minute walk from Whale Museum and 8 minutes by foot from San Juan Islands Museum of Art.

Hot Tub

Spa

Waterfront Home - Watch a Sunset from the Hot Tub, Private Beach, Mooring Buoy

Friday Harbor WA

4.81 mi from city center

With a stay at this vacation home in Friday Harbor, you'll be on the beach, just steps from Wescott Bay and a 3-minute drive from San Juan Island National Historic Park.

Hot Tub

Kitchen

Beach house, heated pool, hot tub, private beach, shared dock

Friday harbor WA

4.74 mi from city center

With a stay at this vacation home in Friday Harbor, you'll be on the beach, just steps from Wescott Bay and a 1-minute drive from San Juan Island National Historic Park.

Pool

Hot Tub

Bird Rock Hotel

35 First Street Friday Harbor WA

$184 nightly

$204 total

Dec 7 - Dec 8

Total with taxes and fees

3.03 mi from city center

A stay at Bird Rock Hotel places you in the heart of Friday Harbor, a 1-minute drive from Whale Museum and 10 minutes from American Camp Visitor Center.

Free WiFi

Housekeeping

Friday Harbor Grand B&B

345 Blair Ave Friday Harbor WA

2.93 mi from city center

With a stay at Friday Harbor Grand B&B in Friday Harbor, you'll be in the historical district, just a 2-minute walk from San Juan Islands Museum of Art and 6 minutes by foot from Whale Museum.

Breakfast included

Free airport shuttle

Perfect location to relax, unwind, renew and enjoy San Juan Island

Friday Harbor WA

5.27 mi from city center

Located in Friday Harbor, this vacation home is by the sea, a 5-minute drive from San Juan Islands Sculpture Park and 6 minutes from Roche Harbor Marina.

Pool

Kitchen

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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

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San Juan Island hotels essential information

Accommodation	869 hotels
Lowest Price	$196
Highest Price	$307
Popular hotels	Inn to the Woods B&B, Friday Harbor House, Snug Harbor Resort, Friday Harbor Suites, Earthbox Inn & Spa, Roche Harbor Resort, Tucker House Inn, Waterfront Home - Watch a Sunset from the Hot Tub, Private Beach, Mooring Buoy, Beach house, heated pool, hot tub, private beach, shared dock, Bird Rock Hotel, Friday Harbor Grand B&B, Perfect location to relax, unwind, renew and enjoy San Juan Island